Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATGGCAGGCGCAAAGCGCGTTCCTACGGCCCCTGCTGCAAC
(((((((.(.((((((.(((.&.))))))))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354844
GeneSymbolCCNB1
Binding site171,214
Score0.846
Seed1
Au0.338
Energy-22.5
Binding len21
Me-7.494
Phylopstem-0.7267538571428572
Phylopflank0.38621023749999983
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure