Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACCCGCGGGCTGTGGT
((((((((((((..(((((..&))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001190997
GeneSymbolSLC6A13
Binding site858,877
Score0.846
Seed1
Au0.353
Energy-20.1
Binding len19
Me-6.084
Phylopstem0.8531841538461538
Phylopflank0.6175718800000001
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure