Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACGCCTGCAGCCACTGCGAT
((((((((((((.((((((((&)))))))).)))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001191022
GeneSymbolCTCF
Binding site926,951
Score0.923
Seed1
Au0.397
Energy-27.0
Binding len25
Me-5.227
Phylopstem6.150211999999999
Phylopflank6.051857681250002
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure