Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAATACGACCTAATAGCTGTT
..(((((((.(((((((((((&))))...)))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001191028
GeneSymbolTNPO3
Binding site139,164
Score1.0
Seed1
Au0.485
Energy-20.7
Binding len25
Me-6.2
Phylopstem0.5199451307142857
Phylopflank0.6575115761250001
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end8
Position5UTR
2D Structure