Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGTCAGCCGTGCTGTT
..(((((.(((((((..(((.&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001191029
GeneSymbolPRR29
Binding site2499,2517
Score0.846
Seed0
Au0.382
Energy-20.6
Binding len18
Me-7.504
Phylopstem0.35687357142857146
Phylopflank-0.26904577125000007
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure