Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCATGTGCGCTACGGAGCTGCAAT
((((((((.((..(((((((.&)))....))))...)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001191037
GeneSymbolPSMD1
Binding site2094,2120
Score0.846
Seed1
Au0.456
Energy-20.1
Binding len26
Me-9.63
Phylopstem5.357715625
Phylopflank5.945513977500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure