Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAAACACAGCCGCCAGAAGATATCAGCTGCAT
.(((((((((((((((..(((&))).....))))))))...........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001191049
GeneSymbolSEC31A
Binding site600,635
Score0.846
Seed1
Au0.544
Energy-23.1
Binding len35
Me-3.793
Phylopstem5.922411180769232
Phylopflank4.25458011625
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end6
PositionCDS
2D Structure