Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAACCGGAACAGATCGAGAAAATCTGGCTTCGGCTCCGCGGG
((((((((((((((((.((((&)))))))))))........................)))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001191057
GeneSymbolPDE1C
Binding site66,113
Score0.846
Seed1
Au0.471
Energy-19.1
Binding len47
Me-3.938
Phylopstem0.7238733476190478
Phylopflank1.0668811075
Longest consecutive pairings11
Position of longest consecutive pairings36
Pairings in 3prime end7
PositionCDS
2D Structure