Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAAAGACTGCAGGTTTAAGAGTCATTGCAAA
((((((((((((((.((((((&))))))..))))))))............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001191059
GeneSymbolPDE1C
Binding site2961,2996
Score0.846
Seed1
Au0.603
Energy-21.3
Binding len35
Me-4.673
Phylopstem4.411091538461538
Phylopflank4.303859153749999
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure