Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCCCCAGATACCTCCTATATTTCCATATTGTGTGCAAAGGA
.(((.(((((((((((.((...&.)).)))))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001193272
GeneSymbolRBBP5
Binding site2086,2129
Score0.846
Seed0
Au0.603
Energy-18.6
Binding len21
Me-7.912
Phylopstem0.3679115909090909
Phylopflank0.28162231499999996
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure