Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGCTCCCAACCCTCCCACAATTAGAGAAGAGCTCTGCAC
.(((((..(((((((((((((&)))))))))))..........................)).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193279
GeneSymbolMID1
Binding site1188,1234
Score0.846
Seed0
Au0.515
Energy-20.1
Binding len46
Me-7.651
Phylopstem4.218367412820513
Phylopflank5.888758887500002
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end8
PositionCDS
2D Structure