Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATTTTGAATGTGCAGCTGCAGCGGGCGT
.(((.((((((((((((....&.))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354909
GeneSymbolPSPC1
Binding site1,31
Score0.923
Seed0
Au0.367
Energy-23.2
Binding len19
Me-7.912
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure