Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACGAGGAAAGGGGGGCCAGG
..(((((((((((((..((...&))..))))..))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354919
GeneSymbolPTCH1
Binding site396,416
Score0.962
Seed1
Au0.485
Energy-21.0
Binding len20
Me-5.19
Phylopstem5.109540266666667
Phylopflank4.1626576925
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure