Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCAACCCAGCTGGAT
.(.((((((.(((((...(((&)))..))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193307
GeneSymbolSAMD9
Binding site1581,1600
Score0.846
Seed0
Au0.588
Energy-20.1
Binding len19
Me-6.826
Phylopstem-0.05314183333333333
Phylopflank-0.03394147500000002
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end5
PositionCDS
2D Structure