Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAATATAGCTGG
...((((((..((((((((..&)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193307
GeneSymbolSAMD9
Binding site3696,3712
Score0.846
Seed0
Au0.618
Energy-17.6
Binding len16
Me-10.582
Phylopstem1.16648250375
Phylopflank0.7978784514999999
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure