Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGGCTGCAAGCTGGAT
.(.(((((((((((((.....&))))))))).)))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193307
GeneSymbolSAMD9
Binding site6449,6466
Score0.885
Seed0
Au0.559
Energy-16.8
Binding len17
Me-5.351
Phylopstem0.5752385428571429
Phylopflank0.2965340825
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end3
Position3UTR
2D Structure