Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGTTTGCCACCGTCTGCAAG
((((((..(((((.(((((.(&).))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193311
GeneSymbolSUGCT
Binding site884,904
Score0.923
Seed0
Au0.544
Energy-17.9
Binding len20
Me-8.652
Phylopstem3.4761246666666668
Phylopflank2.7094217745
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure