Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGACAGCCCTGGCTGCT
..(((((((.((((((..(((&))).)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193317
GeneSymbolVIPAS39
Binding site1393,1412
Score0.821
Seed1
Au0.471
Energy-20.9
Binding len19
Me-6.2
Phylopstem5.085674285714285
Phylopflank4.9007787875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure