Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGATCCAGGAACTGAAGGCGGCTGCAGA
((((((((((((((...((((&))))..))))............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193322
GeneSymbolIKBKE
Binding site1793,1826
Score0.846
Seed1
Au0.382
Energy-21.5
Binding len33
Me-4.906
Phylopstem0.30445856538461546
Phylopflank0.9482366712500002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure