Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGAGCCCAGCTGCC
..(((((((.((((...(((.&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354924
GeneSymbolIRF1
Binding site1377,1395
Score1.0
Seed1
Au0.382
Energy-21.4
Binding len18
Me-7.168
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure