Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGATGACCACAGCAGCT
..((.((((.((((((.((((&)))).)))))).)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354924
GeneSymbolIRF1
Binding site704,724
Score0.923
Seed0
Au0.441
Energy-21.0
Binding len20
Me-10.319
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure