Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGTGGCTGCAAG
((((((((((((.....((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193340
GeneSymbolSLC13A3
Binding site2613,2630
Score0.923
Seed1
Au0.382
Energy-20.9
Binding len17
Me-7.052
Phylopstem2.903318416666666
Phylopflank4.076817655
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure