Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCCCGGTGTGTCAGGA
.((((((((((...........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001193350
GeneSymbolMEF2C
Binding site3461,3479
Score0.846
Seed1
Au0.544
Energy-16.6
Binding len12
Me-10.255
Phylopstem0.1734079
Phylopflank0.97398850875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure