Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACGGCTGCTGTGCTGGGT
.(.((((.((((((((.(((.&))).))))))))...)))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354925
GeneSymbolIRF1
Binding site3180,3202
Score1.0
Seed0
Au0.456
Energy-20.3
Binding len22
Me-7.664
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure