Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGAAGGTTCTGTGTGGGTCGCCGTGGCTGCAT
.((((((((((((........&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193350
GeneSymbolMEF2C
Binding site61,97
Score1.0
Seed1
Au0.5
Energy-21.9
Binding len14
Me-5.619
Phylopstem-0.47871185
Phylopflank-0.2462835975
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure