Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGACCGCACGCTGA
...(((((((((((.(.((((&))))).))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193357
GeneSymbolNUP62
Binding site1242,1261
Score0.923
Seed0
Au0.397
Energy-23.1
Binding len19
Me-7.25
Phylopstem-0.35005909166666666
Phylopflank0.16311478125
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure