Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTAAGATGGATGGGATGGTGCCAGGC
.((((((((......(((((((&)))))))..............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001193361
GeneSymbolEXD2
Binding site1095,1125
Score0.821
Seed1
Au0.515
Energy-16.8
Binding len30
Me-14.089
Phylopstem1.853587975
Phylopflank2.3246230199999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure