Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTCTTGCTGCCGCTGCAGA
(((((((.(((((...((((.&)))).....))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354926
GeneSymbolPPP2R5E
Binding site165,188
Score0.846
Seed1
Au0.397
Energy-21.4
Binding len23
Me-8.077
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure