Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCACCCTCATTGCTGTT
..(((((((.((.(((((((.&))))))).)).))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193397
GeneSymbolPTPA
Binding site2476,2497
Score1.0
Seed1
Au0.456
Energy-19.4
Binding len21
Me-7.489
Phylopstem0.7840927142857143
Phylopflank1.0541696293928573
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure