Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGCAAGCAGCAGCCGCAGTGGCGGA
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193417
GeneSymbolDDX3X
Binding site1889,1918
Score0.846
Seed0
Au0.338
Energy-24.3
Binding len18
Me-8.057
Phylopstem1.6209096363636362
Phylopflank3.3402769162500006
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure