Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCAGCTAAGACCACCAACCAGCTGCAAA
(((((((((.(((((.((((.&)))).)))))............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193421
GeneSymbolTSHZ2
Binding site6440,6472
Score0.923
Seed1
Au0.603
Energy-20.9
Binding len32
Me-5.413
Phylopstem0.49653611111111107
Phylopflank0.03091941874999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure