Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCATACCACTGCACTGCAGC
((((((.((((((.(((.(((&))).))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193426
GeneSymbolSUV39H2
Binding site2460,2481
Score0.846
Seed0
Au0.5
Energy-19.3
Binding len21
Me-6.338
Phylopstem0.12983983333333335
Phylopflank0.12428080200000005
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure