Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATAACCGTTCAGTTGCAGA
((((((((((((((((.....&)))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193434
GeneSymbolPLEKHS1
Binding site3028,3047
Score0.923
Seed1
Au0.603
Energy-20.3
Binding len19
Me-3.938
Phylopstem-0.030919015555555627
Phylopflank-0.13091014800000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure