Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGAAGAGTCCAGGTACCCGAGGGGTATAATCGCAGAAGCAGA
((((..(((((((((((....&.)))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193434
GeneSymbolPLEKHS1
Binding site110,157
Score0.923
Seed0
Au0.544
Energy-19.7
Binding len19
Me-9.958
Phylopstem0.8350001636363636
Phylopflank0.011246920000000021
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end4
Position5UTR
2D Structure