Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTCATTGACCTAGAGGATGAGACCATTGATGCCGAGGTC
(((((((((.(((((.......&.)))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001354928
GeneSymbolVCP
Binding site2132,2175
Score0.923
Seed1
Au0.544
Energy-17.1
Binding len17
Me-5.413
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end1
PositionCDS
2D Structure