Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATAACTGCCAGCTGCT
..((((((((((((((..(((&))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193465
GeneSymbolKANSL1
Binding site4082,4101
Score0.923
Seed1
Au0.382
Energy-22.9
Binding len19
Me-4.957
Phylopstem1.2855392666666665
Phylopflank1.8094885425
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure