Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCTGTGGCTGCT
..((((((((((((...((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193465
GeneSymbolKANSL1
Binding site4216,4233
Score0.923
Seed1
Au0.456
Energy-21.8
Binding len17
Me-5.925
Phylopstem2.5623082499999996
Phylopflank2.9209629500000003
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure