Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCAGCTTGCCAAGAGGGTA
((((((((.....(((((((((&)))))))))...)))))....))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001193475
GeneSymbolPPP1R21
Binding site382,407
Score0.808
Seed1
Au0.588
Energy-17.6
Binding len25
Me-13.697
Phylopstem5.479793333333333
Phylopflank4.879540336249999
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure