Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGTGTTTGAGAAGCTGCAGA
((((((((((((((((.....&))))))))........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193475
GeneSymbolPPP1R21
Binding site1361,1386
Score0.923
Seed1
Au0.588
Energy-19.9
Binding len25
Me-3.938
Phylopstem4.331147829166666
Phylopflank3.740560113124999
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end3
PositionCDS
2D Structure