Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTCTGCGCTGGGAT
((.((((.((((..((((((.&)))))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193476
GeneSymbolSLC26A8
Binding site3280,3299
Score0.846
Seed0
Au0.515
Energy-20.8
Binding len19
Me-9.955
Phylopstem0.581
Phylopflank-0.2506807375000001
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure