Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTTCCAAACTGCAGCGCAGG
((((.(((((((((.......&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193485
GeneSymbolLIMS1
Binding site149,173
Score1.0
Seed0
Au0.456
Energy-19.1
Binding len15
Me-9.025
Phylopstem3.5170786666666665
Phylopflank2.95486186125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure