Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCGTGGATCACAGCTGCAGC
(((((((((.((((...((((&))))....)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354930
GeneSymbolRIPK1
Binding site2800,2823
Score0.846
Seed1
Au0.456
Energy-19.7
Binding len23
Me-6.149
Phylopstem-0.2434787444444445
Phylopflank-0.14256083375000006
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure