Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTCCTGGGCAGCAGAAGTCCAGCAACTGCAGCTCGCT
..((((((((((((((..((.&.)).)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193489
GeneSymbolSECISBP2L
Binding site3366,3407
Score1.0
Seed1
Au0.5
Energy-24.1
Binding len20
Me-4.957
Phylopstem1.7098588666666668
Phylopflank0.9954242875
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure