Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTATCAAAAGCAGCTGGAAA
((.(((((((..(((((((((&)))))).)))..))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193489
GeneSymbolSECISBP2L
Binding site1569,1592
Score0.846
Seed0
Au0.676
Energy-21.5
Binding len23
Me-11.667
Phylopstem1.2798241799999999
Phylopflank2.1152709275
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure