Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTAGATGCCAGGG
.((((((((.....((((....&))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001354931
GeneSymbolRIPK1
Binding site3485,3501
Score1.0
Seed1
Au0.353
Energy-18.8
Binding len16
Me-13.353
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure