Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATATTGTTGAGAATCTCTTACATGCCAGGC
.((((((((.....(.((((((&.)))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001193513
GeneSymbolSLC30A6
Binding site5007,5037
Score0.846
Seed1
Au0.691
Energy-17.5
Binding len21
Me-13.586
Phylopstem-0.27170649999999996
Phylopflank0.10029897187499995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure