Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATATTGTTGAGAATCTCTTACATGCCAGGC
.((((((((.....(.((((((&.)))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001193514
GeneSymbolSLC30A6
Binding site4818,4848
Score0.846
Seed1
Au0.691
Energy-17.5
Binding len21
Me-13.586
Phylopstem-0.053414249999999996
Phylopflank0.084836634625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure