Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTGCTGGAGCTGCGGGAGATGCCAGGTG
(((((((((....(((((.(((&.))))))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001193520
GeneSymbolRASAL1
Binding site845,875
Score0.923
Seed1
Au0.324
Energy-21.3
Binding len23
Me-12.641
Phylopstem0.2728186
Phylopflank0.011728944999999973
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure