Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCGGTGCGGCCGCAGCGCC
..((.(((((((((((((((.&))).....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193522
GeneSymbolRIPOR1
Binding site117,140
Score0.923
Seed0
Au0.338
Energy-24.3
Binding len23
Me-9.076
Phylopstem2.0157542500000005
Phylopflank2.5592698037499995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure