Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGGCAGCTTTGGCTGTCAATATATGCGCCGCCCGAGGGCTGCAGG
((((((((((((.((((....&.)))))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001193530
GeneSymbolCCT6B
Binding site112,161
Score0.846
Seed1
Au0.426
Energy-20.5
Binding len23
Me-5.227
Phylopstem0.04445592352941175
Phylopflank0.8294736174999999
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end4
PositionCDS
2D Structure